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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52875848_52877960_R

Intron Information:

Intron Rank:

144692

Intron Class:

major

Intron Phase:

Intron Coordinates:

52875848 - 52877960

Intron Length:

2113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TGTTTTTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

89.2

0.88

0.7

83.8

Minor 5ss

46.1

-0.4

3.2

63.6

48.1

Minor BPS

64.2

0.52

1.5

79.54

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041890

52874190 - 52878136

3947