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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52892754_52893318_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

52892754 - 52893318

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGGCGCGG

5'SS Class:

weak_major

3'SS Sequence:

GCGGTGGTGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGGT

U12 Branch Point Sequence:

TGGTGCTGGTGG

Flanking Amino Acid:

GRRPGAAADPGAPTPPSLSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.3

38.9

39.2

Major BPS

30.2

-1.2

4.2

51.1

46.3

Major PPT

52.1

0.05

1.2

45.5

45.8

Minor 5ss

18.1

-3.7

3.9

19.9

37.9

Minor BPS

28.3

-1.8

3.5

39.34

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020803

52887989 - 52893365

5377