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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52898985_52899170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52898985 - 52899170

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

CCGCCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GGAGGCTGAGCT

Flanking Amino Acid:

YDKEKPISFHKFPLTRPDLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

66.7

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

61.2

0.25

0.9

53.4

Minor 5ss

28.9

-2.4

3.1

34.2

35.4

Minor BPS

41.8

-0.5

2.1

55.57

45.7

Associated Gene:

Gene:

THAP1

Ensembl Gene ID:

ENSAPLG00000026693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028799

52898509 - 52903719

5211