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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52899367_52902747_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52899367 - 52902747

Intron Length:

3381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGCCG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

TGCAAATGTACT

Flanking Amino Acid:

IFCYTEPNEKPEEFPEQPED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

57.9

46.7

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

36.6

-1.5

3.3

48.4

47.3

Minor BPS

39.9

-0.7

2.1

57.12

44.2

Associated Gene:

Gene:

THAP1

Ensembl Gene ID:

ENSAPLG00000026693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028799

52898509 - 52903719

5211