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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52917413_52919170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52917413 - 52919170

Intron Length:

1758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAA

U12 Branch Point Sequence:

GTCTCCAAGATG

Flanking Amino Acid:

MLCALCLTHSGVSAFISVAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

55.5

0.14

1.3

66.7

39.7

Major PPT

87.7

0.85

0.7

80.3

31.8

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

45.4

-0.5

51.87

43.1

Associated Gene:

Gene:

CHRNB3

Ensembl Gene ID:

ENSAPLG00000012846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034166

52917033 - 52924458

7426

ENSAPLT00000013397

52917295 - 52925499

8205