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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52923236_52923434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52923236 - 52923434

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCACCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

TTCCTGTCCACC

Flanking Amino Acid:

LWLPDIVLFENADGRFEGSL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

69.6

0.49

59.5

Major PPT

70.4

0.46

0.8

61.3

34.9

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

40.5

-0.7

2.4

55.1

43.3

Associated Gene:

Gene:

CHRNB3

Ensembl Gene ID:

ENSAPLG00000012846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046873

52917033 - 52924458

7426

ENSAPLT00000034166

52917033 - 52924458

7426

ENSAPLT00000013397

52917295 - 52925499

8205