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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52924318_52925364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52924318 - 52925364

Intron Length:

1047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAT

U12 Branch Point Sequence:

CTCTCCTCCACA

Flanking Amino Acid:

HVKKEHFIRQVVQDWKFVAQ

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

0.3

1.3

65.3

43.7

Major PPT

77.6

0.62

0.7

71.8

26.3

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

53.9

0.12

67.11

45.4

Associated Gene:

Gene:

CHRNB3

Ensembl Gene ID:

ENSAPLG00000012846

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013397

52917295 - 52925499

8205