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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52935817_52937546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52935817 - 52937546

Intron Length:

1730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

ATGTCTGTATTT

Flanking Amino Acid:

ELAITQLTNVDEVNQIMETN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

84.9

0.78

0.7

77.9

36.1

Minor 5ss

-1.4

47.2

42.5

Minor BPS

-0

2.2

69.42

42.6

Associated Gene:

Gene:

CHRNA6

Ensembl Gene ID:

ENSAPLG00000012469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013009

52930162 - 52939358

9197