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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5294838_5294955_F

Intron Information:

Intron Rank:

138680

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5294838 - 5294955

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTTCTTG

5'SS Class:

weak_major

3'SS Sequence:

CTCTATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTATAT

U12 Branch Point Sequence:

TTCTCTATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.2

56.3

43.1

Major BPS

66.7

0.41

1.1

63.2

42.8

Major PPT

80.3

0.68

0.9

77.3

35.3

Minor 5ss

2.4

65.4

45.8

Minor BPS

54.6

0.22

1.9

76.24

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022800

5285681 - 5297792

12112