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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5295078_5297420_F

Intron Information:

Intron Rank:

138681

Intron Class:

major

Intron Phase:

Intron Coordinates:

5295078 - 5297420

Intron Length:

2343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGAATG

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATGTCTTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

68.1

42.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

74.5

0.55

1.1

75.2

38.8

Minor 5ss

42.7

-0.8

2.8

49.5

46.5

Minor BPS

59.3

0.37

1.7

75.25

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022800

5285681 - 5297792

12112