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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52967220_52979282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

52967220 - 52979282

Intron Length:

12063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCACACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TATTGTTTCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

77.8

0.63

0.9

71.1

34.1

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

54.1

0.12

2.2

71.96

40.5

Associated Gene:

Gene:

SLC26A1

Ensembl Gene ID:

ENSAPLG00000019677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028470

52964283 - 53000038

35756