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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_52979366_52999942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

52979366 - 52999942

Intron Length:

20577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTACTCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATTTCTAATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

76.7

0.6

0.8

74.2

30.8

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

0.23

1.9

75.01

41.8

Associated Gene:

Gene:

SLC26A1

Ensembl Gene ID:

ENSAPLG00000019677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028470

52964283 - 53000038

35756