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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53033650_53033739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53033650 - 53033739

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTCTTACTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTTATTTTAACA

Flanking Amino Acid:

YSGPRTPDGREIVFYKVIDY

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.1

35.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

81.7

0.71

0.8

74.3

35.5

Minor 5ss

35.6

-1.6

3.3

45.6

43.6

Minor BPS

70.6

0.64

1.3

75.15

36.6

Associated Gene:

Gene:

PDE6B

Ensembl Gene ID:

ENSAPLG00000010965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011489

53026704 - 53047521

20818