Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53035587_53035767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53035587 - 53035767

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTGC

5'SS Class:

major

3'SS Sequence:

CTATTGCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATTAA

U12 Branch Point Sequence:

TATTGCTTCAAG

Flanking Amino Acid:

AAADEMFNFQEGPLDESGWT

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

66.7

39.8

Major BPS

54.2

0.1

1.1

36.7

Major PPT

67.1

0.38

1.1

64.1

41.7

Minor 5ss

37.1

-1.5

3.3

50.7

45.8

Minor BPS

-0.3

2.3

61.76

45.7

Associated Gene:

Gene:

PDE6B

Ensembl Gene ID:

ENSAPLG00000010965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011489

53026704 - 53047521

20818