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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53039581_53040517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53039581 - 53040517

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCACCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

AAATTCTCACCC

Flanking Amino Acid:

VAQTMFTLLMTGKLKRYYTD

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

73.6

32.9

Major BPS

0.87

0.8

85.6

Major PPT

76.2

0.59

0.8

66.3

35.4

Minor 5ss

36.2

-1.6

3.3

43.1

45.5

Minor BPS

48.9

-0.1

1.8

58.97

39.6

Associated Gene:

Gene:

PDE6B

Ensembl Gene ID:

ENSAPLG00000010965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011489

53026704 - 53047521

20818