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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53040628_53041616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53040628 - 53041616

Intron Length:

989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTTACGCAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTTTTCTTTACG

Flanking Amino Acid:

HRGTNNLYQMKSQNPLAKLH

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

78.2

36.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

64.2

0.32

1.1

56.4

43.5

Minor 5ss

43.7

-0.7

2.9

59.5

38.8

Minor BPS

72.7

0.57

1.6

79.16

37.2

Associated Gene:

Gene:

PDE6B

Ensembl Gene ID:

ENSAPLG00000010965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011489

53026704 - 53047521

20818