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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53053006_53053276_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

53053006 - 53053276

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTGGCGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAACCAC

U12 Branch Point Sequence:

CTGTCGGTAACC

Flanking Amino Acid:

MGMIYGKKRYDYLKPIAEEE

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

49.1

-0

1.3

58.8

37.5

Major PPT

59.5

0.22

1.2

54.2

45.8

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

47.5

-0.2

2.6

65.47

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029938

53051443 - 53053805

2363