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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53053332_53053478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53053332 - 53053478

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

GAGGGCACACCC

Flanking Amino Acid:

PPVQVSPLIKFTRYSALLMG

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

76.7

0.6

0.8

69.9

30.9

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

33.3

-1.2

2.1

37.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029938

53051443 - 53053805

2363