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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53057934_53058490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53057934 - 53058490

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTCTCTCCACA

Flanking Amino Acid:

IVATLLILDICEDNVPDPRE

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

78.6

0.71

78.6

Major PPT

0.79

0.7

80.3

25.2

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

53.5

0.1

72.76

39.1

Associated Gene:

Gene:

TMEM175

Ensembl Gene ID:

ENSAPLG00000010828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018657

53056277 - 53070090

13814

ENSAPLT00000011280

53057270 - 53069846

12577