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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53066220_53068112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53066220 - 53068112

Intron Length:

1893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

GGTATCTTAACT

Flanking Amino Acid:

IVTVAWAAHVRLFQVIELID

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

69.8

0.45

64.9

36.5

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

73.7

0.82

1.3

82.36

38.3

Associated Gene:

Gene:

TMEM175

Ensembl Gene ID:

ENSAPLG00000010828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011280

53057270 - 53069846

12577

ENSAPLT00000018657

53056277 - 53070090

13814