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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53075126_53079817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53075126 - 53079817

Intron Length:

4692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

GAAATGTTATGT

Flanking Amino Acid:

TSESVAEGHSDKMCDQISDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

75.9

35.2

Major BPS

72.5

0.56

1.2

63.4

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

33.7

-1.9

2.9

Minor BPS

38.3

-0.8

2.3

50.98

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010745

53075053 - 53094558

19506