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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53079896_53083677_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53079896 - 53083677

Intron Length:

3782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

SIDPDAKVACECVAKTGMIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.6

0.91

0.6

85.8

21.3

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010745

53075053 - 53094558

19506