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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53238819_53262364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53238819 - 53262364

Intron Length:

23546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAG

5'SS Class:

major

3'SS Sequence:

GTTTTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCTAT

U12 Branch Point Sequence:

TTTTTGTTACAG

Flanking Amino Acid:

LLCYLSSEVSRNAAAVGHGC

Intron Amino Acid Position:

867

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.7

41.1

Major BPS

58.7

0.22

1.5

58.5

47.9

Major PPT

85.5

0.8

0.9

79.9

37.7

Minor 5ss

38.8

-1.3

2.8

48.4

47.4

Minor BPS

47.5

-0.3

2.4

63.72

44.3

Associated Gene:

Gene:

PIGG

Ensembl Gene ID:

ENSAPLG00000030626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030996

53191370 - 53262669

71300

ENSAPLT00000027455

53183281 - 53262590

79310