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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5323993_5324616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5323993 - 5324616

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TGCGCACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTTAT

U12 Branch Point Sequence:

TCCCGCTTATTT

Flanking Amino Acid:

GHKQTEDSSNVYEQDDLSEQ

Intron Amino Acid Position:

1409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.3

67.1

44.6

Major BPS

63.9

0.35

1.2

42.7

Major PPT

67.3

0.39

0.9

58.9

37.3

Minor 5ss

41.1

-1

2.8

51.4

38.8

Minor BPS

47.9

-0

64.57

46.4

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278