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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5336794_5338305_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5336794 - 5338305

Intron Length:

1512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TTTTCCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCTCTTTTAATC

Flanking Amino Acid:

IPMDSQPTNPPVVSAIPVPT

Intron Amino Acid Position:

1238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.3

66.2

39.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.3

0.93

0.6

89.3

19.5

Minor 5ss

33.4

-1.9

2.7

42.8

36.9

Minor BPS

0.36

1.2

63.56

36.4

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009845

5323903 - 5600180

276278

ENSAPLT00000044019

5323903 - 5571574

247672