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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5338423_5340685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5338423 - 5340685

Intron Length:

2263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AGATTTTCAACT

Flanking Amino Acid:

QLGTKSTPQPAAETEDVGSS

Intron Amino Acid Position:

1199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

64.2

41.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

27.6

-2.6

34.8

41.4

Minor BPS

59.3

0.37

1.5

72.05

38.6

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278