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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53398156_53401830_F

Intron Information:

Intron Rank:

144949

Intron Class:

major

Intron Phase:

Intron Coordinates:

53398156 - 53401830

Intron Length:

3675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

ATTCCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GAGGGAACAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.1

57.9

41.1

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

86.2

0.81

0.7

80.9

30.3

Minor 5ss

36.9

-1.5

41.5

Minor BPS

35.3

-1

2.1

48.55

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024832

53397897 - 53402031

4135