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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5340913_5345925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5340913 - 5345925

Intron Length:

5013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACGTTTG

5'SS Class:

major

3'SS Sequence:

TCCTTTGCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ACGTCCTTAACG

Flanking Amino Acid:

CTRRSSAQQRKKRATHSASK

Intron Amino Acid Position:

1123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

72.7

39.6

Major BPS

100

1.24

0.5

100

Major PPT

81.3

0.7

0.8

76.3

32.3

Minor 5ss

44.5

-0.6

57.8

41.2

Minor BPS

75.5

0.66

1.3

69.62

43.7

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278