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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5346089_5347056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5346089 - 5347056

Intron Length:

968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAATGCA

5'SS Class:

major

3'SS Sequence:

GTTGTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

CACCACTAATCG

Flanking Amino Acid:

TNLIDRSSLNEPPIGQMHPP

Intron Amino Acid Position:

1069

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

68.7

36.2

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

80.6

0.69

0.9

73.7

36.9

Minor 5ss

32.8

-2

3.2

41.8

44.8

Minor BPS

39.7

-0.9

38.61

44.1

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278