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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53509085_53516255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53509085 - 53516255

Intron Length:

7171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCGGG

5'SS Class:

major

3'SS Sequence:

TGTACCCCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

TCTCCCTGTACC

Flanking Amino Acid:

SRGACPLGGKSELNSFLWTI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.2

47.1

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

64.5

0.33

38.1

Minor 5ss

41.3

-1

3.3

55.9

48.3

Minor BPS

56.4

0.18

1.8

69.37

41.8

Associated Gene:

Gene:

TRABD2A

Ensembl Gene ID:

ENSAPLG00000026690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033636

53508082 - 53585889

77808