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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53516814_53559706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53516814 - 53559706

Intron Length:

42893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAA

U12 Branch Point Sequence:

TTTTCCTCCTTC

Flanking Amino Acid:

HPLNGLNFSQVIFALNQTLL

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

71.2

34.5

Major BPS

56.2

0.15

64.6

32.2

Major PPT

73.4

0.53

0.7

30.7

Minor 5ss

26.8

-2.7

2.9

32.6

42.4

Minor BPS

41.6

-0.6

3.6

70.35

41.6

Associated Gene:

Gene:

TRABD2A

Ensembl Gene ID:

ENSAPLG00000026690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033636

53508082 - 53585889

77808