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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5354533_5358435_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5354533 - 5358435

Intron Length:

3903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGGATC

5'SS Class:

major

3'SS Sequence:

CTCTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CCGGCTCTAACG

Flanking Amino Acid:

SDPVFFRTLKVEHPDKMAND

Intron Amino Acid Position:

1036

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

70.7

39.3

Major BPS

72.3

0.55

73.3

28.9

Major PPT

88.6

0.87

0.7

24.1

Minor 5ss

39.3

-1.2

51.9

Minor BPS

46.5

-0.4

1.9

46.87

46.5

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009845

5323903 - 5600180

276278

ENSAPLT00000044019

5323903 - 5571574

247672