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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53562172_53577526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53562172 - 53577526

Intron Length:

15355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGAC

5'SS Class:

major

3'SS Sequence:

TTCTTAACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTTAACT

Flanking Amino Acid:

DKSFFFAFGAGHFMGNNTVI

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

70.2

33.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

80.6

0.69

0.8

74.9

33.6

Minor 5ss

39.2

-1.2

3.1

48.3

42.5

Minor BPS

94.2

1.47

0.6

103.6

17.6

Associated Gene:

Gene:

TRABD2A

Ensembl Gene ID:

ENSAPLG00000026690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033636

53508082 - 53585889

77808