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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53577618_53581882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53577618 - 53581882

Intron Length:

4265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATGCAT

5'SS Class:

major

3'SS Sequence:

CTCCTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

CAAACATTATCC

Flanking Amino Acid:

EHTPAGQAINNGKPPKSLLA

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

65.2

40.4

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

84.2

0.77

0.7

76.2

32.4

Minor 5ss

34.2

-1.8

3.4

47.8

42.2

Minor BPS

46.9

-0.2

1.9

54.77

42.5

Associated Gene:

Gene:

TRABD2A

Ensembl Gene ID:

ENSAPLG00000026690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033636

53508082 - 53585889

77808