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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5358631_5361428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5358631 - 5361428

Intron Length:

2798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACACATT

5'SS Class:

major

3'SS Sequence:

GTTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

GAAGCACTAACC

Flanking Amino Acid:

PPLEANGKITAYILFYTLDK

Intron Amino Acid Position:

971

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.1

66.6

44.6

Major BPS

64.5

0.36

65.2

28.2

Major PPT

93.5

0.98

0.7

92.3

26.6

Minor 5ss

44.1

-0.6

3.3

66.2

45.1

Minor BPS

46.1

-0.3

55.81

41.4

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278