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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5367333_5370615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5367333 - 5370615

Intron Length:

3283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

TGTATGGACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTATTTTGGAAT

Flanking Amino Acid:

YESATTRSMTDPIDPLEVDF

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

68.8

43.8

Major BPS

76.3

0.65

67.3

39.3

Major PPT

60.3

0.23

1.1

50.6

47.1

Minor 5ss

28.2

-2.5

2.7

32.3

42.2

Minor BPS

52.5

0.16

1.6

72.95

37.8

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278