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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53698277_53711223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53698277 - 53711223

Intron Length:

12947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTTTGTTTAAAG

Flanking Amino Acid:

QLSLLQIIDVDEKNQVLITN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

74.1

36.5

Major BPS

79.1

0.72

69.3

38.4

Major PPT

77.2

0.61

77.9

34.4

Minor 5ss

34.7

-1.7

2.9

41.5

39.2

Minor BPS

62.6

0.26

1.9

72.3

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046151

53675730 - 53713711

37982

ENSAPLT00000041617

53675730 - 53712759

37030

ENSAPLT00000025946

53675730 - 53711974

36245

ENSAPLT00000008046

53675730 - 53711872

36143