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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53760629_53761197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53760629 - 53761197

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AATATGTTAACT

Flanking Amino Acid:

SQPFLTGIKMLLRNKPYIIL

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

87.3

0.84

0.6

81.3

30.8

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

56.8

0.29

2.1

76.08

40.2

Associated Gene:

Gene:

SLC49A3

Ensembl Gene ID:

ENSAPLG00000008297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008625

53754522 - 53771074

16553