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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53815906_53836019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

53815906 - 53836019

Intron Length:

20114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTACC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TACTTTATAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.7

31.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

88.2

0.86

0.6

24.1

Minor 5ss

37.1

-1.5

2.6

47.1

41.2

Minor BPS

55.6

0.17

1.5

64.46

36.3

Associated Gene:

Gene:

PCGF3

Ensembl Gene ID:

ENSAPLG00000012623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024169

53815747 - 53858268

42522