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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53836138_53839155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53836138 - 53839155

Intron Length:

3018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TCCTTGTTACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

ATTVTECLHTFCRSCLVKYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

76.1

34.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.8

0.58

0.9

69.3

40.6

Minor 5ss

35.9

-1.6

2.9

43.1

43.9

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

PCGF3

Ensembl Gene ID:

ENSAPLG00000012623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013148

53799796 - 53858268

58473

ENSAPLT00000012715

53829274 - 53862524

33251

ENSAPLT00000035816

53804731 - 53858268

53538

ENSAPLT00000026994

53804731 - 53856451

51721

ENSAPLT00000024169

53815747 - 53858268

42522