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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5383818_5387890_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5383818 - 5387890

Intron Length:

4073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATGCA

5'SS Class:

major

3'SS Sequence:

GTTTGAATCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TGTGTTTGAATC

Flanking Amino Acid:

TAETPENDLDESQVPDQPSS

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

70.1

33.9

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

69.6

0.44

59.5

45.1

Minor 5ss

32.5

-2

3.2

38.3

41.8

Minor BPS

53.5

0.09

1.5

62.98

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278