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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53854652_53856370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53854652 - 53856370

Intron Length:

1719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGAAA

5'SS Class:

major

3'SS Sequence:

TTTGTTTTGCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

AACAAATTAACT

Flanking Amino Acid:

LGIMGRTYGESWTYYAMKRF

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

68.4

38.1

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

81.8

0.72

76.9

42.1

Minor 5ss

29.9

-2.3

3.3

39.1

46.3

Minor BPS

49.8

0.07

1.8

67.18

42.5

Associated Gene:

Gene:

PCGF3

Ensembl Gene ID:

ENSAPLG00000012623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026994

53804731 - 53856451

51721