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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53858265_53862411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53858265 - 53862411

Intron Length:

4147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGAGAA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTCATTTAATT

Flanking Amino Acid:

LLHYRPKMDLLMVKVTIQ*

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

64.7

35.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

93.2

0.97

0.6

88.6

21.1

Minor 5ss

32.7

-2

3.5

48.1

47.5

Minor BPS

66.7

0.6

1.4

80.91

34.4

Associated Gene:

Gene:

PCGF3

Ensembl Gene ID:

ENSAPLG00000012623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012715

53829274 - 53862524

33251