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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5388002_5390272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5388002 - 5390272

Intron Length:

2271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TACGATTTCATT

Flanking Amino Acid:

EPNNLWYLFTGLEKGSQYSF

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.2

85.2

32.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.3

0.64

72.6

42.4

Minor 5ss

-1.8

3.3

49.7

46.6

Minor BPS

45.2

-0.2

1.9

61.11

43.5

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009845

5323903 - 5600180

276278

ENSAPLT00000044019

5323903 - 5571574

247672