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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5390415_5422477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5390415 - 5422477

Intron Length:

32063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTCTTTTTTACA

Flanking Amino Acid:

NVSLEVVNSRSIKVSWLPPP

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

0.3

62.3

30.4

Major PPT

94.8

1.01

0.6

90.9

21.3

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

64.3

0.44

1.6

74.15

37.7

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278