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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53951031_53956450_F

Intron Information:

Intron Rank:

129236

Intron Class:

major

Intron Phase:

Intron Coordinates:

53951031 - 53956450

Intron Length:

5420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAATTCTT

5'SS Class:

major

3'SS Sequence:

TCCTTTTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTTAT

U12 Branch Point Sequence:

TCCTTTTTTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

74.6

41.7

Major BPS

61.2

0.28

1.2

42.8

Major PPT

86.8

0.83

0.6

83.2

25.4

Minor 5ss

39.8

-1.1

3.1

51.1

45.2

Minor BPS

53.4

0.1

1.6

61.35

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020809

53950861 - 53962993

12133