Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_53956607_53960691_F

Intron Information:

Intron Rank:

129237

Intron Class:

major

Intron Phase:

Intron Coordinates:

53956607 - 53960691

Intron Length:

4085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCTCAC

5'SS Class:

major

3'SS Sequence:

CTCATTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTCATTTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

63.4

43.1

Major BPS

100

1.24

0.5

100

Major PPT

76.5

0.6

0.9

72.4

36.4

Minor 5ss

-1.2

3.1

52.9

44.2

Minor BPS

63.7

0.43

1.3

66.81

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020809

53950861 - 53962993

12133