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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54091677_54095151_F

Intron Information:

Intron Rank:

139796

Intron Class:

major

Intron Phase:

Intron Coordinates:

54091677 - 54095151

Intron Length:

3475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAA

U12 Branch Point Sequence:

CTTTTCTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.1

67.4

43.6

Major BPS

0.08

61.4

34.3

Major PPT

84.9

0.79

0.7

80.1

25.5

Minor 5ss

30.9

-2.2

2.6

34.3

41.1

Minor BPS

54.4

0.13

70.77

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035989

54090535 - 54095247

4713