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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_54091677_54098874_F

Intron Information:

Intron Rank:

139795

Intron Class:

major

Intron Phase:

Intron Coordinates:

54091677 - 54098874

Intron Length:

7198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTGTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.1

67.4

43.6

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

80.2

0.68

0.9

80.6

31.5

Minor 5ss

30.9

-2.2

2.6

34.3

41.1

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034230

54090535 - 54101832

11298