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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5422528_5427798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5422528 - 5427798

Intron Length:

5271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGGCAC

U12 Branch Point Sequence:

TTTGTCCCACTT

Flanking Amino Acid:

EDVTVTTLSDVPSAMPQNVS

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

46.5

-0.2

1.4

54.8

42.1

Major PPT

86.6

0.82

0.7

24.1

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

44.1

-0.3

2.1

43.5

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278